STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_08112UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (366 aa)    
Predicted Functional Partners:
SPPG_03998
Uncharacterized protein.
    
 0.982
SPPG_09562
DNA repair protein rad18.
    
 0.947
SPPG_09429
E3 ubiquitin protein ligase.
    
 0.940
SPPG_04797
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.931
SPPG_06169
HECT domain-containing protein.
    
 0.908
SPPG_04246
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.878
SPPG_08433
Uncharacterized protein.
    
 0.872
SPPG_05152
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.848
SPPG_02478
Rad60-SLD domain-containing protein.
   
 0.829
SPPG_05583
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.828
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.