STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_07800TPR_REGION domain-containing protein. (204 aa)    
Predicted Functional Partners:
SPPG_04850
Uncharacterized protein.
   
 0.848
SPPG_04644
Fibronectin type-III domain-containing protein.
   
 0.848
SPPG_02018
Ubiquitin carboxyl-terminal hydrolase.
    
 0.768
SPPG_01611
PHD domain-containing protein.
   
 0.667
SPPG_02325
Uncharacterized protein.
     
 0.662
SPPG_03253
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
  0.631
SPPG_06099
BHLH domain-containing protein.
    
  0.618
SPPG_04859
CMGC/GSK protein kinase; Belongs to the protein kinase superfamily.
   
 0.610
SPPG_06018
AGC protein kinase.
  
 0.592
SPPG_04668
BZIP domain-containing protein.
    
  0.592
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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