STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_08111STE/STE20/FRAY protein kinase. (419 aa)    
Predicted Functional Partners:
SPPG_09501
CAMK/CAMKL/LKB protein kinase.
  
 
0.982
SPPG_07218
Uncharacterized protein.
    
 0.953
SPPG_00716
J domain-containing protein.
    
 
 0.880
SPPG_03030
Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic.
   
 
 0.871
SPPG_04953
Sec62 family protein translocation protein.
    
 
 0.870
MED17
Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 
 0.800
SPPG_04282
Uncharacterized protein.
    
 
 0.800
SPPG_03808
Uncharacterized protein.
    
 
 0.799
SPPG_01095
Protein transporter Sec61 subunit alpha isoform 2.
    
 
 0.780
SPPG_04818
AMPKBI domain-containing protein.
     
 0.772
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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