STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_05960Peptidase_M1 domain-containing protein. (1027 aa)    
Predicted Functional Partners:
SPPG_07472
TAFII28 domain-containing protein.
    
 0.999
SPPG_07298
Uncharacterized protein.
    
 0.999
SPPG_06733
Uncharacterized protein.
    
 0.999
SPPG_04720
Uncharacterized protein.
    
 0.999
SPPG_09096
TAF domain-containing protein.
    
 0.999
SPPG_03497
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.999
SPPG_03285
TATA-box-binding protein.
    
 0.999
SPPG_03559
TAFII55_N domain-containing protein.
    
 0.999
SPPG_01784
TFIID_20kDa domain-containing protein.
    
 0.999
SPPG_03008
TAF4 domain-containing protein.
    
 0.999
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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