SPPG_06196 protein (Spizellomyces punctatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SPPG_06196

Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (443 aa)

Predicted Functional Partners:

SPPG_05229

0.999

SPPG_01197

0.999

SPPG_02321

0.966

SPPG_07908

0.965

SPPG_07385

0.965

SPPG_01237

0.965

SPPG_09413

0.956

SPPG_07387

0.952

SPPG_04098

0.950

SPPG_02246

0.948

Your Current Organism:

Spizellomyces punctatus

NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPPG_01197	SPPG_01237	A0A0L0HSB2	A0A0L0HQX4	Uncharacterized protein.	Serine/threonine-protein kinase.	0.665
SPPG_01197	SPPG_02321	A0A0L0HSB2	A0A0L0HPE0	Uncharacterized protein.	Peptidase C50 domain-containing protein.	0.720
SPPG_01197	SPPG_05229	A0A0L0HSB2	A0A0L0HFQ2	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.999
SPPG_01197	SPPG_06196	A0A0L0HSB2	A0A0L0HC88	Uncharacterized protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.999
SPPG_01197	SPPG_07908	A0A0L0HSB2	A0A0L0H751	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	0.997
SPPG_01237	SPPG_01197	A0A0L0HQX4	A0A0L0HSB2	Serine/threonine-protein kinase.	Uncharacterized protein.	0.665
SPPG_01237	SPPG_02246	A0A0L0HQX4	A0A0L0HQ64	Serine/threonine-protein kinase.	Rab-GAP TBC domain-containing protein.	0.992
SPPG_01237	SPPG_02321	A0A0L0HQX4	A0A0L0HPE0	Serine/threonine-protein kinase.	Peptidase C50 domain-containing protein.	0.992
SPPG_01237	SPPG_05229	A0A0L0HQX4	A0A0L0HFQ2	Serine/threonine-protein kinase.	Serine/threonine-protein phosphatase.	0.950
SPPG_01237	SPPG_06196	A0A0L0HQX4	A0A0L0HC88	Serine/threonine-protein kinase.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.965
SPPG_01237	SPPG_07385	A0A0L0HQX4	A0A0L0H9Y1	Serine/threonine-protein kinase.	WEE protein kinase.	0.997
SPPG_01237	SPPG_07387	A0A0L0HQX4	A0A0L0H7F0	Serine/threonine-protein kinase.	Uncharacterized protein.	0.958
SPPG_01237	SPPG_07908	A0A0L0HQX4	A0A0L0H751	Serine/threonine-protein kinase.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	0.695
SPPG_01237	SPPG_09413	A0A0L0HQX4	A0A0L0H9J1	Serine/threonine-protein kinase.	Septum-promoting GTP-binding protein 1.	0.981
SPPG_02246	SPPG_01237	A0A0L0HQ64	A0A0L0HQX4	Rab-GAP TBC domain-containing protein.	Serine/threonine-protein kinase.	0.992
SPPG_02246	SPPG_02321	A0A0L0HQ64	A0A0L0HPE0	Rab-GAP TBC domain-containing protein.	Peptidase C50 domain-containing protein.	0.434
SPPG_02246	SPPG_06196	A0A0L0HQ64	A0A0L0HC88	Rab-GAP TBC domain-containing protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.948
SPPG_02246	SPPG_07387	A0A0L0HQ64	A0A0L0H7F0	Rab-GAP TBC domain-containing protein.	Uncharacterized protein.	0.969
SPPG_02246	SPPG_09413	A0A0L0HQ64	A0A0L0H9J1	Rab-GAP TBC domain-containing protein.	Septum-promoting GTP-binding protein 1.	0.996
SPPG_02321	SPPG_01197	A0A0L0HPE0	A0A0L0HSB2	Peptidase C50 domain-containing protein.	Uncharacterized protein.	0.720