STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_05401ARID domain-containing protein. (1471 aa)    
Predicted Functional Partners:
SPPG_08006
GATA-type domain-containing protein.
    
 
 0.971
SPPG_01617
Uncharacterized protein.
   
 
 0.934
SPPG_02282
SWIB domain-containing protein.
   
 
 0.868
SPPG_02054
GATA-type domain-containing protein.
    
 
 0.829
SPPG_01840
Uncharacterized protein.
    
 0.817
SPPG_01114
SWIRM domain-containing protein.
    
 
 0.798
SPPG_00704
Uncharacterized protein.
    
 
 0.798
SPPG_00258
WD_REPEATS_REGION domain-containing protein.
    
 0.758
SPPG_04875
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.754
SPPG_07980
Uncharacterized protein.
    
 
 0.749
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.