STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_04935Rhomboid domain-containing protein. (376 aa)    
Predicted Functional Partners:
SPPG_00836
ATP-dependent metallopeptidase HflB.
   
 
 0.793
SPPG_06074
Prohibitin.
   
 0.769
SPPG_04753
PHB domain-containing protein.
   
 0.732
SPPG_04515
ATP-dependent metallopeptidase HflB.
   
 
 0.719
SPPG_01103
PHB domain-containing protein.
   
 0.668
SPPG_09561
Prohibitin.
   
 0.641
SPPG_00426
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.632
SPPG_05588
PHB domain-containing protein.
   
 0.585
SPPG_04686
Uncharacterized protein.
     
 0.523
SPPG_01552
Uncharacterized protein; Belongs to the AAA ATPase family.
     
 0.523
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.