STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_044264-hydroxyphenylpyruvate dioxygenase. (379 aa)    
Predicted Functional Partners:
SPPG_06315
Homogentisate 1,2-dioxygenase.
  
 0.988
SPPG_02498
Tyrosine aminotransferase.
   
 
 0.921
SPPG_05282
Tryptophan synthase.
   
 
 0.886
SPPG_08075
Propionyl-CoA carboxylase beta chain, mitochondrial.
  
 
 0.885
SPPG_06889
Uncharacterized protein.
  
 
 0.885
SPPG_01695
Uncharacterized protein.
  
 
 0.885
SPPG_04184
Histidinol-phosphate transaminase.
    
 0.857
SPPG_05868
Aspartate aminotransferase.
  
 
 0.841
SPPG_03967
Aminotran_1_2 domain-containing protein.
  
 
 0.841
SPPG_07870
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
     
 0.839
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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