STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_03428Fe2OG dioxygenase domain-containing protein. (340 aa)    
Predicted Functional Partners:
SPPG_05282
Tryptophan synthase.
    
  0.800
SPPG_08740
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
    
 0.799
SPPG_00944
Aminotran_5 domain-containing protein.
  
 
 0.784
SPPG_09185
Uncharacterized protein; Belongs to the cytochrome b5 family.
  
 0.734
SPPG_01834
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.725
SPPG_07384
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.721
SPPG_07716
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.704
SPPG_06764
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.704
SPPG_02736
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.704
SPPG_00897
PARP catalytic domain-containing protein.
  
 0.704
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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