STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_09131Uncharacterized protein. (564 aa)    
Predicted Functional Partners:
SPPG_02888
Uncharacterized protein.
   
 0.997
SPPG_07259
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.986
SPPG_06705
Slu7 domain-containing protein.
    
 0.976
SPPG_02017
Uncharacterized protein.
   
 0.891
SPPG_09528
RRM domain-containing protein.
   
0.863
SPPG_05855
Uncharacterized protein.
   
 0.863
SPPG_05532
RRM domain-containing protein.
   
 0.863
SPPG_06371
RRM domain-containing protein.
   
 0.857
SPPG_02744
RRM domain-containing protein.
   
 0.857
SPPG_01940
PWI domain-containing protein.
   
 0.846
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.