Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SPPG_01733 | SPPG_02475 | A0A0L0HMK3 | A0A0L0HLN3 | DNA-binding protein, 42 kDa. | CobW C-terminal domain-containing protein. | 0.410 |
SPPG_01733 | SPPG_03255 | A0A0L0HMK3 | A0A0L0HJ07 | DNA-binding protein, 42 kDa. | Uncharacterized protein. | 0.688 |
SPPG_01733 | SPPG_03629 | A0A0L0HMK3 | A0A0L0HLY9 | DNA-binding protein, 42 kDa. | 40S ribosomal protein S29. | 0.842 |
SPPG_01733 | SPPG_04334 | A0A0L0HMK3 | A0A0L0HJN6 | DNA-binding protein, 42 kDa. | Elp3 domain-containing protein. | 0.784 |
SPPG_01895 | SPPG_02475 | A0A0L0HPT4 | A0A0L0HLN3 | Ribosomal L28 family protein. | CobW C-terminal domain-containing protein. | 0.591 |
SPPG_01895 | SPPG_03255 | A0A0L0HPT4 | A0A0L0HJ07 | Ribosomal L28 family protein. | Uncharacterized protein. | 0.981 |
SPPG_01895 | SPPG_03629 | A0A0L0HPT4 | A0A0L0HLY9 | Ribosomal L28 family protein. | 40S ribosomal protein S29. | 0.963 |
SPPG_01895 | SPPG_04334 | A0A0L0HPT4 | A0A0L0HJN6 | Ribosomal L28 family protein. | Elp3 domain-containing protein. | 0.963 |
SPPG_01895 | SPPG_08847 | A0A0L0HPT4 | A0A0L0HTQ3 | Ribosomal L28 family protein. | Ribosomal protein L33. | 0.999 |
SPPG_02475 | SPPG_01733 | A0A0L0HLN3 | A0A0L0HMK3 | CobW C-terminal domain-containing protein. | DNA-binding protein, 42 kDa. | 0.410 |
SPPG_02475 | SPPG_01895 | A0A0L0HLN3 | A0A0L0HPT4 | CobW C-terminal domain-containing protein. | Ribosomal L28 family protein. | 0.591 |
SPPG_02475 | SPPG_03255 | A0A0L0HLN3 | A0A0L0HJ07 | CobW C-terminal domain-containing protein. | Uncharacterized protein. | 0.497 |
SPPG_02475 | SPPG_03392 | A0A0L0HLN3 | A0A0L0HLB6 | CobW C-terminal domain-containing protein. | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.606 |
SPPG_02475 | SPPG_03629 | A0A0L0HLN3 | A0A0L0HLY9 | CobW C-terminal domain-containing protein. | 40S ribosomal protein S29. | 0.525 |
SPPG_02475 | SPPG_04334 | A0A0L0HLN3 | A0A0L0HJN6 | CobW C-terminal domain-containing protein. | Elp3 domain-containing protein. | 0.508 |
SPPG_02475 | SPPG_08469 | A0A0L0HLN3 | A0A0L0H3P4 | CobW C-terminal domain-containing protein. | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.410 |
SPPG_02475 | SPPG_08538 | A0A0L0HLN3 | A0A0L0H3V0 | CobW C-terminal domain-containing protein. | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.607 |
SPPG_02475 | SPPG_08847 | A0A0L0HLN3 | A0A0L0HTQ3 | CobW C-terminal domain-containing protein. | Ribosomal protein L33. | 0.552 |
SPPG_02475 | SPPG_08874 | A0A0L0HLN3 | A0A0L0HVG2 | CobW C-terminal domain-containing protein. | DNA-binding protein, 42 kDa. | 0.410 |
SPPG_03255 | SPPG_01733 | A0A0L0HJ07 | A0A0L0HMK3 | Uncharacterized protein. | DNA-binding protein, 42 kDa. | 0.688 |
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