STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_0362940S ribosomal protein S29. (56 aa)    
Predicted Functional Partners:
SPPG_08570
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
SPPG_08592
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
SPPG_08138
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
  
 0.999
SPPG_07795
40S ribosomal protein S3-A.
  
 0.999
SPPG_07637
KOW domain-containing protein.
  
 0.999
SPPG_08073
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.999
SPPG_07348
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
SPPG_06741
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.999
SPPG_06692
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.999
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.