STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_02785Uncharacterized protein. (540 aa)    
Predicted Functional Partners:
SPPG_03643
Uncharacterized protein.
   
 0.995
SPPG_00633
MFAP1 domain-containing protein.
   
 0.964
SPPG_04754
U1-type domain-containing protein.
    
 0.912
SPPG_02705
Uncharacterized protein.
   
 0.898
SPPG_05749
Uncharacterized protein.
    
 0.894
SPPG_03669
Matrin-type domain-containing protein.
    
 0.860
SPPG_00566
Ubiquitin-like protein 5.
    
 0.852
SPPG_07402
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
  0.819
SPPG_02894
Pre-mRNA-processing-splicing factor 8.
    
 
 0.811
SPPG_01598
Uncharacterized protein.
   
 
 0.806
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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