STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_02811CASP_C domain-containing protein. (690 aa)    
Predicted Functional Partners:
SPPG_08259
GRIP domain-containing protein.
    
 
 0.773
SPPG_06079
Uncharacterized protein.
    
 0.580
SPPG_08410
Uncharacterized protein.
   
  
 0.538
SPPG_07175
Uncharacterized protein.
    
 
 0.531
SPPG_07573
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
      
 0.526
SPPG_02939
Diphthine synthase.
      
 0.526
SPPG_02910
U3 small nucleolar RNA-associated protein 22.
      
 0.525
SPPG_01512
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
      
 0.499
SPPG_03135
Guanylate kinase.
    
 
 0.491
SPPG_01952
Guanylate kinase.
    
 
 0.491
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.