STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_00257DUF2062 domain-containing protein. (186 aa)    
Predicted Functional Partners:
SPPG_03961
Ubiquitin-60S ribosomal protein L40.
    
 0.691
SPPG_01470
RRN7-type domain-containing protein.
    
 0.691
SPPG_00365
Uncharacterized protein.
    
 0.691
SPPG_06227
Polyubiquitin.
    
  0.684
SPPG_03613
Polyubiquitin.
    
  0.684
SPPG_00844
Ubiquitin-like domain-containing protein.
    
  0.684
SPPG_07955
CIA30 domain-containing protein.
    
  0.666
SPPG_06203
Ubiquitin-40S ribosomal protein S27a.
    
  0.666
SPPG_01636
Ubiquitin-40S ribosomal protein S27a.
    
  0.666
SPPG_09556
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
    
  0.663
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.