STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_00442U-box domain-containing protein. (1134 aa)    
Predicted Functional Partners:
SPPG_06169
HECT domain-containing protein.
   
 0.993
SPPG_07353
UV excision repair protein Rad23.
   
 0.978
SPPG_07952
Uncharacterized protein.
    
 
 0.973
SPPG_00608
Uncharacterized protein.
    
 
 0.970
SPPG_06149
Uncharacterized protein.
    
 
 0.966
SPPG_02010
Uncharacterized protein.
    
 
 0.950
SPPG_05152
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.937
SPPG_06801
Uncharacterized protein.
   
 0.906
SPPG_03371
Uncharacterized protein.
  
 
 0.855
SPPG_03075
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
  
 
 0.855
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.