STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_00539Uncharacterized protein. (457 aa)    
Predicted Functional Partners:
SPPG_04246
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.759
SPPG_07078
Uncharacterized protein.
    
 0.714
SPPG_07955
CIA30 domain-containing protein.
    
  0.687
SPPG_06227
Polyubiquitin.
    
 0.687
SPPG_06203
Ubiquitin-40S ribosomal protein S27a.
    
  0.687
SPPG_03613
Polyubiquitin.
    
 0.687
SPPG_01636
Ubiquitin-40S ribosomal protein S27a.
    
  0.687
SPPG_00844
Ubiquitin-like domain-containing protein.
    
  0.684
SPPG_08287
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.675
SPPG_06897
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.675
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
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