STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPPG_00822Pentatricopeptide repeat domain-containing protein. (827 aa)    
Predicted Functional Partners:
SPPG_04274
Spindle pole body component.
    
  0.697
SPPG_09268
Spindle pole body component.
    
  0.652
SPPG_03883
Uncharacterized protein.
    
  0.652
SPPG_02977
Spindle pole body component.
    
  0.650
SPPG_08016
Spindle pole body component.
    
 0.632
SPPG_09461
Ubiquitin-like domain-containing protein; Belongs to the tubulin family.
   
  0.621
SPPG_01551
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
  0.621
SPPG_06597
Uncharacterized protein; Belongs to the NDK family.
    
  0.542
SPPG_03589
Uncharacterized protein.
    
 0.531
SPPG_00148
SET domain-containing protein.
    
 0.531
Your Current Organism:
Spizellomyces punctatus
NCBI taxonomy Id: 645134
Other names: S. punctatus DAOM BR117, Spizellomyces punctatus DAOM BR117
Server load: low (14%) [HD]