STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG11564.1Endo-1,4-beta-xylanase, GH35 family. (877 aa)    
Predicted Functional Partners:
SDG73203.1
Glycosyl hydrolases family 43.
  
  0.821
SDG26815.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.795
SDG13112.1
Endo-1,4-beta-D-glucanase Y.
 
   
 0.775
SDG56804.1
Beta-xylosidase.
  
  
  0.771
SDG60419.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
  0.768
SDG26698.1
Alpha/beta hydrolase family protein.
 
  
  0.764
SDG85984.1
Poly(3-hydroxybutyrate) depolymerase.
  
 
   0.764
SDG30924.1
Hypothetical protein.
  
  
  0.761
SDG67247.1
alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.757
SDG67679.1
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family.
 
  
  0.738
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.