STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG22734.1Uncharacterized membrane protein SpoIIM, required for sporulation. (330 aa)    
Predicted Functional Partners:
SDG22798.1
Protein of unknown function.
 
     0.947
SDG22828.1
Hypothetical protein.
 
     0.947
SDG22767.1
Hypothetical protein.
 
     0.944
SDG22709.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.941
SDG22890.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.905
SDG22858.1
MoxR-like ATPase.
 
    0.736
SDG38068.1
Predicted DNA-binding protein, MmcQ/YjbR family.
  
     0.463
SDG12012.1
Spore maturation protein SpmA.
   
  
 0.457
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.