STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG30459.1CarboxypepD_reg-like domain-containing protein. (965 aa)    
Predicted Functional Partners:
SDG30426.1
Transcriptional regulator, LacI family.
       0.773
SDG11443.1
OmpA family protein.
  
     0.693
SDG18436.1
Protein of unknown function.
  
     0.685
SDH19910.1
CarboxypepD_reg-like domain-containing protein.
  
     0.662
SDH22704.1
Hypothetical protein.
  
    0.658
SDH19996.1
Hypothetical protein.
  
     0.647
SDG53744.1
Hypothetical protein.
  
     0.642
SDG30484.1
Iron complex outermembrane recepter protein.
 
     0.634
SDG17308.1
Protein TonB.
  
  0.633
SDG89388.1
Hypothetical protein.
  
    0.628
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.