STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG27466.1Protein of unknown function. (342 aa)    
Predicted Functional Partners:
SDG27411.1
methylmalonyl-CoA mutase metallochaperone MeaB.
       0.803
SDG27515.1
MG2 domain-containing protein.
       0.786
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.772
SDG18436.1
Protein of unknown function.
  
     0.730
SDG21806.1
Hypothetical protein.
  
     0.724
SDG29956.1
TPR repeat-containing protein.
  
     0.678
SDG27360.1
Por secretion system C-terminal sorting domain-containing protein.
  
    0.664
SDH22482.1
Major Facilitator Superfamily protein.
  
     0.654
SDG22676.1
Long-chain fatty acid transport protein.
  
     0.616
SDH38857.1
Family of unknown function.
  
     0.609
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.