Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG27569.1 | SDG27667.1 | SAMN04487901_10235 | SAMN04487901_10239 | Sulfur carrier protein ThiS. | Adenylyltransferase and sulfurtransferase. | 0.977 |
SDG27569.1 | SDG27697.1 | SAMN04487901_10235 | SAMN04487901_10240 | Sulfur carrier protein ThiS. | 2-iminoacetate synthase. | 0.951 |
SDG27569.1 | SDG27727.1 | SAMN04487901_10235 | SAMN04487901_10241 | Sulfur carrier protein ThiS. | Thiamine-phosphate pyrophosphorylase. | 0.956 |
SDG27569.1 | SDG27755.1 | SAMN04487901_10235 | SAMN04487901_10242 | Sulfur carrier protein ThiS. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.951 |
SDG27569.1 | SDH09710.1 | SAMN04487901_10235 | SAMN04487901_11660 | Sulfur carrier protein ThiS. | Thiamine-phosphate pyrophosphorylase. | 0.903 |
SDG27569.1 | thiC | SAMN04487901_10235 | SAMN04487901_10238 | Sulfur carrier protein ThiS. | Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. | 0.948 |
SDG27569.1 | thiE | SAMN04487901_10235 | SAMN04487901_10236 | Sulfur carrier protein ThiS. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.957 |
SDG27569.1 | thiG | SAMN04487901_10235 | SAMN04487901_10237 | Sulfur carrier protein ThiS. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.998 |
SDG27667.1 | SDG27569.1 | SAMN04487901_10239 | SAMN04487901_10235 | Adenylyltransferase and sulfurtransferase. | Sulfur carrier protein ThiS. | 0.977 |
SDG27667.1 | SDG27697.1 | SAMN04487901_10239 | SAMN04487901_10240 | Adenylyltransferase and sulfurtransferase. | 2-iminoacetate synthase. | 0.888 |
SDG27667.1 | SDG27727.1 | SAMN04487901_10239 | SAMN04487901_10241 | Adenylyltransferase and sulfurtransferase. | Thiamine-phosphate pyrophosphorylase. | 0.919 |
SDG27667.1 | SDG27755.1 | SAMN04487901_10239 | SAMN04487901_10242 | Adenylyltransferase and sulfurtransferase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.904 |
SDG27667.1 | SDH09710.1 | SAMN04487901_10239 | SAMN04487901_11660 | Adenylyltransferase and sulfurtransferase. | Thiamine-phosphate pyrophosphorylase. | 0.641 |
SDG27667.1 | thiC | SAMN04487901_10239 | SAMN04487901_10238 | Adenylyltransferase and sulfurtransferase. | Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. | 0.932 |
SDG27667.1 | thiE | SAMN04487901_10239 | SAMN04487901_10236 | Adenylyltransferase and sulfurtransferase. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.875 |
SDG27667.1 | thiG | SAMN04487901_10239 | SAMN04487901_10237 | Adenylyltransferase and sulfurtransferase. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.987 |
SDG27697.1 | SDG27569.1 | SAMN04487901_10240 | SAMN04487901_10235 | 2-iminoacetate synthase. | Sulfur carrier protein ThiS. | 0.951 |
SDG27697.1 | SDG27667.1 | SAMN04487901_10240 | SAMN04487901_10239 | 2-iminoacetate synthase. | Adenylyltransferase and sulfurtransferase. | 0.888 |
SDG27697.1 | SDG27727.1 | SAMN04487901_10240 | SAMN04487901_10241 | 2-iminoacetate synthase. | Thiamine-phosphate pyrophosphorylase. | 0.978 |
SDG27697.1 | SDG27755.1 | SAMN04487901_10240 | SAMN04487901_10242 | 2-iminoacetate synthase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.868 |
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