STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (417 aa)    
Predicted Functional Partners:
uxaC
Glucuronate isomerase.
 
 
 0.970
SDG89139.1
Fructuronate reductase.
 
 
 0.962
SDH36906.1
Altronate hydrolase.
 
 
 0.928
SDG87117.1
2-dehydro-3-deoxygluconokinase.
 
  
 0.923
SDG47970.1
Ribose 5-phosphate isomerase B.
  
 
  0.828
SDH39086.1
Tagaturonate reductase.
 
 
 0.821
SDG45732.1
2-dehydro-3-deoxygluconokinase.
 
  
 0.757
SDG38379.1
Fructokinase.
    
 0.637
SDG16401.1
Gluconate 5-dehydrogenase.
  
 
 0.590
SDG22303.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.590
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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