STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG55521.1Rhamnosyl/mannosyltransferase. (372 aa)    
Predicted Functional Partners:
SDG55543.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.893
SDG55635.1
D,D-heptose 1,7-bisphosphate phosphatase.
 
 0.861
SDG55491.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.839
SDG55608.1
D-sedoheptulose 7-phosphate isomerase.
  
 
  0.786
SDG55575.1
D-glycero-alpha-D-manno-heptose-7-phosphate kinase.
  
    0.747
SDG55662.1
Hypothetical protein.
  
    0.690
SDG15170.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.681
SDH31998.1
1,4-alpha-glucan branching enzyme.
   
 0.678
SDG15452.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.620
SDG81814.1
ATP-dependent DNA helicase RecQ.
    
 
 0.561
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.