STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG53997.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
SDG53942.1
Chromosome partitioning protein.
       0.826
SDG53961.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
       0.826
SDG54059.1
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
 
  
  0.811
SDG54028.1
Membrane-bound lytic murein transglycosylase D.
  
    0.803
SDH09292.1
Hypothetical protein.
  
    0.747
SDG71500.1
Hypothetical protein.
  
     0.742
SDG36434.1
Protein of unknown function.
  
     0.726
SDG97893.1
Surface antigen.
  
    0.717
SDG60047.1
Protein of unknown function.
  
     0.715
SDG40014.1
OstA-like protein.
  
    0.698
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
Server load: low (20%) [HD]