Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG27755.1 | SDG61397.1 | SAMN04487901_10242 | SAMN04487901_10655 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.912 |
SDG27755.1 | SDG77101.1 | SAMN04487901_10242 | SAMN04487901_10952 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Pyridoxine kinase. | 0.684 |
SDG27755.1 | pdxS | SAMN04487901_10242 | SAMN04487901_10654 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Pyridoxal 5'-phosphate synthase pdxS subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.460 |
SDG27755.1 | pdxT | SAMN04487901_10242 | SAMN04487901_10653 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 5'-phosphate synthase pdxT subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.430 |
SDG61397.1 | SDG27755.1 | SAMN04487901_10655 | SAMN04487901_10242 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.912 |
SDG61397.1 | SDG77101.1 | SAMN04487901_10655 | SAMN04487901_10952 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Pyridoxine kinase. | 0.684 |
SDG61397.1 | pdxS | SAMN04487901_10655 | SAMN04487901_10654 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Pyridoxal 5'-phosphate synthase pdxS subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.910 |
SDG61397.1 | pdxT | SAMN04487901_10655 | SAMN04487901_10653 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 5'-phosphate synthase pdxT subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.905 |
SDG77101.1 | SDG27755.1 | SAMN04487901_10952 | SAMN04487901_10242 | Pyridoxine kinase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.684 |
SDG77101.1 | SDG61397.1 | SAMN04487901_10952 | SAMN04487901_10655 | Pyridoxine kinase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.684 |
SDG77101.1 | SDG77130.1 | SAMN04487901_10952 | SAMN04487901_10953 | Pyridoxine kinase. | L-glyceraldehyde 3-phosphate reductase. | 0.730 |
SDG77101.1 | SDH08954.1 | SAMN04487901_10952 | SAMN04487901_11637 | Pyridoxine kinase. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.599 |
SDG77101.1 | acpP | SAMN04487901_10952 | SAMN04487901_10954 | Pyridoxine kinase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.416 |
SDG77101.1 | nnrD | SAMN04487901_10952 | SAMN04487901_101207 | Pyridoxine kinase. | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family. | 0.496 |
SDG77101.1 | pdxS | SAMN04487901_10952 | SAMN04487901_10654 | Pyridoxine kinase. | Pyridoxal 5'-phosphate synthase pdxS subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.872 |
SDG77101.1 | pdxT | SAMN04487901_10952 | SAMN04487901_10653 | Pyridoxine kinase. | 5'-phosphate synthase pdxT subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.872 |
SDG77130.1 | SDG77101.1 | SAMN04487901_10953 | SAMN04487901_10952 | L-glyceraldehyde 3-phosphate reductase. | Pyridoxine kinase. | 0.730 |
SDG77130.1 | acpP | SAMN04487901_10953 | SAMN04487901_10954 | L-glyceraldehyde 3-phosphate reductase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.536 |
SDH08954.1 | SDG77101.1 | SAMN04487901_11637 | SAMN04487901_10952 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Pyridoxine kinase. | 0.599 |
acpP | SDG77101.1 | SAMN04487901_10954 | SAMN04487901_10952 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Pyridoxine kinase. | 0.416 |
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