STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG85148.1Starch-binding associating with outer membrane. (593 aa)    
Predicted Functional Partners:
SDG85179.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.945
SDG85127.1
Fasciclin domain-containing protein.
 
    0.929
SDG85099.1
Uncaracterized surface protein containing fasciclin (FAS1) repeats.
 
    0.896
SDG85067.1
TonB-linked outer membrane protein, SusC/RagA family.
 
    0.879
SDG26954.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.840
SDG27058.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.840
SDG95101.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.840
SDG46266.1
Fibronectin type III domain-containing protein.
 
  
  0.825
SDG46234.1
Hypothetical protein.
  
 
   0.806
SDG26925.1
SusD family protein.
  
    0.774
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.