Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG98672.1 | SDG98746.1 | SAMN04487901_11446 | SAMN04487901_11448 | EamA-like transporter family protein. | B3/B4 domain-containing protein (DNA/RNA-binding domain of Phe-tRNA-synthetase). | 0.705 |
SDG98672.1 | SDG98860.1 | SAMN04487901_11446 | SAMN04487901_11450 | EamA-like transporter family protein. | Hypothetical protein. | 0.509 |
SDG98672.1 | ligA | SAMN04487901_11446 | SAMN04487901_11449 | EamA-like transporter family protein. | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.705 |
SDG98672.1 | trmD | SAMN04487901_11446 | SAMN04487901_11451 | EamA-like transporter family protein. | tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.488 |
SDG98672.1 | truA | SAMN04487901_11446 | SAMN04487901_11447 | EamA-like transporter family protein. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.802 |
SDG98746.1 | SDG98672.1 | SAMN04487901_11448 | SAMN04487901_11446 | B3/B4 domain-containing protein (DNA/RNA-binding domain of Phe-tRNA-synthetase). | EamA-like transporter family protein. | 0.705 |
SDG98746.1 | SDG98860.1 | SAMN04487901_11448 | SAMN04487901_11450 | B3/B4 domain-containing protein (DNA/RNA-binding domain of Phe-tRNA-synthetase). | Hypothetical protein. | 0.554 |
SDG98746.1 | ligA | SAMN04487901_11448 | SAMN04487901_11449 | B3/B4 domain-containing protein (DNA/RNA-binding domain of Phe-tRNA-synthetase). | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.847 |
SDG98746.1 | trmD | SAMN04487901_11448 | SAMN04487901_11451 | B3/B4 domain-containing protein (DNA/RNA-binding domain of Phe-tRNA-synthetase). | tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.530 |
SDG98746.1 | truA | SAMN04487901_11448 | SAMN04487901_11447 | B3/B4 domain-containing protein (DNA/RNA-binding domain of Phe-tRNA-synthetase). | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.773 |
SDG98860.1 | SDG98672.1 | SAMN04487901_11450 | SAMN04487901_11446 | Hypothetical protein. | EamA-like transporter family protein. | 0.509 |
SDG98860.1 | SDG98746.1 | SAMN04487901_11450 | SAMN04487901_11448 | Hypothetical protein. | B3/B4 domain-containing protein (DNA/RNA-binding domain of Phe-tRNA-synthetase). | 0.554 |
SDG98860.1 | ligA | SAMN04487901_11450 | SAMN04487901_11449 | Hypothetical protein. | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.554 |
SDG98860.1 | trmD | SAMN04487901_11450 | SAMN04487901_11451 | Hypothetical protein. | tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.737 |
SDG98860.1 | truA | SAMN04487901_11450 | SAMN04487901_11447 | Hypothetical protein. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.554 |
ligA | SDG98672.1 | SAMN04487901_11449 | SAMN04487901_11446 | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | EamA-like transporter family protein. | 0.705 |
ligA | SDG98746.1 | SAMN04487901_11449 | SAMN04487901_11448 | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | B3/B4 domain-containing protein (DNA/RNA-binding domain of Phe-tRNA-synthetase). | 0.847 |
ligA | SDG98860.1 | SAMN04487901_11449 | SAMN04487901_11450 | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | Hypothetical protein. | 0.554 |
ligA | trmD | SAMN04487901_11449 | SAMN04487901_11451 | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.759 |
ligA | truA | SAMN04487901_11449 | SAMN04487901_11447 | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.835 |
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