STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG99202.1SH3 domain-containing protein. (858 aa)    
Predicted Functional Partners:
SDG99236.1
Tetratricopeptide repeat-containing protein.
 
   0.936
SDG99275.1
Ca-activated chloride channel family protein.
 
   
 0.930
SDG99376.1
Protein of unknown function DUF58.
 
  
 0.930
SDG99311.1
Ca-activated chloride channel family protein.
 
  
 0.929
SDG99341.1
Hypothetical protein.
 
   
 0.928
SDG99162.1
Undecaprenyl-diphosphatase.
       0.794
SDG99127.1
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.793
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.787
SDG99409.1
MoxR-like ATPase.
 
   
 0.709
SDG93021.1
Signal transduction histidine kinase.
  
 
  0.657
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.