STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH00070.1Hypothetical protein. (1475 aa)    
Predicted Functional Partners:
SDG99952.1
Hypothetical protein.
       0.773
SDH23561.1
Hypothetical protein.
  
 
  0.640
SDG63058.1
Hypothetical protein.
  
     0.609
SDG21108.1
Thioredoxin-like.
  
     0.606
SDH08185.1
Replication restart DNA helicase PriA.
  
     0.595
SDG28262.1
TIGR02172 family protein.
  
     0.587
SDG46266.1
Fibronectin type III domain-containing protein.
 
  
  0.584
SDG22376.1
CarboxypepD_reg-like domain-containing protein.
  
 
   0.552
SDH00146.1
Hypothetical protein.
       0.542
SDG36738.1
Putative collagen-binding domain of a collagenase.
    
  0.533
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.