Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG12866.1 | SDG18568.1 | SAMN04487901_10154 | SAMN04487901_101209 | Fructokinase. | Fructose-bisphosphate aldolase, class II. | 0.586 |
SDG12866.1 | SDG38379.1 | SAMN04487901_10154 | SAMN04487901_103127 | Fructokinase. | Fructokinase. | 0.912 |
SDG12866.1 | SDG48028.1 | SAMN04487901_10154 | SAMN04487901_104163 | Fructokinase. | Transketolase; Belongs to the transketolase family. | 0.416 |
SDG12866.1 | SDG65883.1 | SAMN04487901_10154 | SAMN04487901_10721 | Fructokinase. | Mannose-6-phosphate isomerase, type 1. | 0.865 |
SDG12866.1 | fbp | SAMN04487901_10154 | SAMN04487901_11552 | Fructokinase. | Fructose-1,6-bisphosphatase-3. | 0.855 |
SDG12866.1 | pfkA | SAMN04487901_10154 | SAMN04487901_110100 | Fructokinase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.858 |
SDG12866.1 | pfp | SAMN04487901_10154 | SAMN04487901_11652 | Fructokinase. | Pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.858 |
SDG12866.1 | pgi | SAMN04487901_10154 | SAMN04487901_10729 | Fructokinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.869 |
SDG18568.1 | SDG12866.1 | SAMN04487901_101209 | SAMN04487901_10154 | Fructose-bisphosphate aldolase, class II. | Fructokinase. | 0.586 |
SDG18568.1 | SDG38379.1 | SAMN04487901_101209 | SAMN04487901_103127 | Fructose-bisphosphate aldolase, class II. | Fructokinase. | 0.620 |
SDG18568.1 | SDG48028.1 | SAMN04487901_101209 | SAMN04487901_104163 | Fructose-bisphosphate aldolase, class II. | Transketolase; Belongs to the transketolase family. | 0.936 |
SDG18568.1 | SDG65883.1 | SAMN04487901_101209 | SAMN04487901_10721 | Fructose-bisphosphate aldolase, class II. | Mannose-6-phosphate isomerase, type 1. | 0.490 |
SDG18568.1 | fbp | SAMN04487901_101209 | SAMN04487901_11552 | Fructose-bisphosphate aldolase, class II. | Fructose-1,6-bisphosphatase-3. | 0.908 |
SDG18568.1 | pfkA | SAMN04487901_101209 | SAMN04487901_110100 | Fructose-bisphosphate aldolase, class II. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.931 |
SDG18568.1 | pfp | SAMN04487901_101209 | SAMN04487901_11652 | Fructose-bisphosphate aldolase, class II. | Pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.890 |
SDG18568.1 | pgi | SAMN04487901_101209 | SAMN04487901_10729 | Fructose-bisphosphate aldolase, class II. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.969 |
SDG38379.1 | SDG12866.1 | SAMN04487901_103127 | SAMN04487901_10154 | Fructokinase. | Fructokinase. | 0.912 |
SDG38379.1 | SDG18568.1 | SAMN04487901_103127 | SAMN04487901_101209 | Fructokinase. | Fructose-bisphosphate aldolase, class II. | 0.620 |
SDG38379.1 | SDG48028.1 | SAMN04487901_103127 | SAMN04487901_104163 | Fructokinase. | Transketolase; Belongs to the transketolase family. | 0.416 |
SDG38379.1 | SDG65883.1 | SAMN04487901_103127 | SAMN04487901_10721 | Fructokinase. | Mannose-6-phosphate isomerase, type 1. | 0.865 |
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