STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH16219.1Alpha-L-arabinofuranosidase. (670 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.821
uxaC
Glucuronate isomerase.
     
 0.768
SDG28399.1
Glycosyl hydrolases family 43.
 
 0.761
SDG26698.1
Alpha/beta hydrolase family protein.
 
 
  0.749
SDG30852.1
Glycosyl hydrolases family 43.
  
 
  0.734
SDG28615.1
Hypothetical protein.
 
 
  0.712
SDG94236.1
Arabinan endo-1,5-alpha-L-arabinosidase.
 
 
  0.652
SDG52893.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
 
  0.643
SDG13715.1
Hypothetical protein.
  
     0.639
SDG43369.1
Hypothetical protein.
  
     0.620
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.