STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH20886.1Hypothetical protein. (379 aa)    
Predicted Functional Partners:
SDH20840.1
His-Xaa-Ser system radical SAM maturase HxsB.
       0.773
SDH20864.1
His-Xaa-Ser system radical SAM maturase HxsC.
       0.773
SDH20656.1
Protein phosphatase 2C.
       0.615
SDH20726.1
Hypothetical protein.
       0.615
SDH20755.1
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein.
       0.615
SDH20779.1
Hypothetical protein.
       0.615
SDH20810.1
His-Xaa-Ser system protein HxsD.
       0.615
SDH20602.1
Uncharacterized conserved protein YegL, contains vWA domain of TerY type.
       0.593
SDH20547.1
Protein kinase domain-containing protein.
       0.584
SDH20521.1
TerY-C metal binding domain-containing protein.
       0.547
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.