STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH23981.1Nucleotidyl transferase. (344 aa)    
Predicted Functional Partners:
SDH24126.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing).
 
 
  0.949
SDH24155.1
Aminotransferase, LLPSF_NHT_00031 family; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.939
SDH24043.1
N-acetylneuraminate synthase.
 
  
 0.915
SDH24012.1
N-acylneuraminate cytidylyltransferase.
 
    0.911
SDH24071.1
Carbamoyl-phosphate synthase large subunit.
       0.773
SDH24094.1
Diaminopimelate decarboxylase.
       0.773
SDG44014.1
Phosphotransferase enzyme family protein.
  
 
 0.630
SDG21972.1
Phosphomannomutase.
 
 
 0.614
SDG73768.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.601
SDG63211.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
 
 0.510
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.