STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH26649.1Sel1 repeat-containing protein. (358 aa)    
Predicted Functional Partners:
SDG82675.1
Hypothetical protein.
 
     0.776
SDG93650.1
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.706
SDH08126.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
   
 0.700
SDG54501.1
PAS domain S-box-containing protein.
 
 
 0.686
SDH26590.1
ATPase family associated with various cellular activities (AAA).
    
 0.684
SDG66110.1
Signal transduction histidine kinase.
  
 
 0.588
SDH26621.1
Protein of unknown function.
       0.531
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.478
SDG72185.1
Do/DeqQ family serine protease.
    
 0.400
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.