STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH33913.1Leucine rich repeat-containing protein. (333 aa)    
Predicted Functional Partners:
SDH00230.1
Listeria/Bacterioides repeat-containing protein.
  
  0.584
SDH33873.1
Nucleoside-diphosphate-sugar epimerase.
       0.543
SDH00070.1
Hypothetical protein.
  
  0.533
SDH08609.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
   0.499
SDH33836.1
PAP2 superfamily protein.
       0.478
SDG35249.1
Hypothetical protein.
    
   0.470
SDG11904.1
Protein of unknown function.
   
  0.464
SDG11950.1
LruC domain-containing protein.
   
  0.464
SDG11982.1
Hypothetical protein.
   
  0.464
SDG23060.1
Carboxypeptidase regulatory-like domain-containing protein.
   
  0.464
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.