STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH42340.1Glycosidase. (539 aa)    
Predicted Functional Partners:
SDH42379.1
[Acyl-carrier-protein] S-malonyltransferase.
     
 0.864
SDH31998.1
1,4-alpha-glucan branching enzyme.
 
 
 0.849
SDH09873.1
Starch synthase.
  
 
 0.839
SDG52199.1
Starch phosphorylase.
 
 0.790
SDH42416.1
Hypothetical protein.
       0.768
SDG28587.1
4-alpha-glucanotransferase.
 
 
 0.766
SDG66061.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
 
 
 0.669
SDH22418.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
  
 
 0.619
SDG34656.1
Glucokinase.
    
 0.597
SDH03428.1
Glucokinase.
    
 0.597
Your Current Organism:
Prevotella sp. BP1148
NCBI taxonomy Id: 645274
Other names: P. sp. BP1-148, Prevotella sp. BP1-148
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.