Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFF88405.1 | EFF88407.1 | SSTG_06054 | SSTG_06056 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.996 |
EFF88405.1 | EFF88963.1 | SSTG_06054 | SSTG_04833 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Formate acetyltransferase. | 0.919 |
EFF88405.1 | EFF89488.1 | SSTG_06054 | SSTG_05358 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Oxidoreductase alpha subunit. | 0.988 |
EFF88405.1 | EFF89630.1 | SSTG_06054 | SSTG_05500 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Malate oxidoreductase. | 0.902 |
EFF88405.1 | EFF90197.1 | SSTG_06054 | SSTG_00515 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Formate dehydrogenase. | 0.998 |
EFF88405.1 | EFF90198.1 | SSTG_06054 | SSTG_00516 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Reductase with Sulfite oxidase, middle catalytic domain-containing protein. | 0.413 |
EFF88405.1 | EFF90460.1 | SSTG_06054 | SSTG_00778 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Formate dehydrogenase. | 0.988 |
EFF88405.1 | EFF90562.1 | SSTG_06054 | SSTG_00880 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Conserved hypothetical protein. | 0.990 |
EFF88405.1 | EFF94311.1 | SSTG_06054 | SSTG_04631 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.948 |
EFF88405.1 | ppc | SSTG_06054 | SSTG_01799 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.921 |
EFF88407.1 | EFF88405.1 | SSTG_06056 | SSTG_06054 | Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 4Fe-4S ferredoxin, iron-sulfur binding protein. | 0.996 |
EFF88407.1 | EFF88963.1 | SSTG_06056 | SSTG_04833 | Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate acetyltransferase. | 0.855 |
EFF88407.1 | EFF89630.1 | SSTG_06056 | SSTG_05500 | Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Malate oxidoreductase. | 0.881 |
EFF88407.1 | EFF90197.1 | SSTG_06056 | SSTG_00515 | Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase. | 0.967 |
EFF88407.1 | EFF90562.1 | SSTG_06056 | SSTG_00880 | Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Conserved hypothetical protein. | 0.774 |
EFF88963.1 | EFF88405.1 | SSTG_04833 | SSTG_06054 | Formate acetyltransferase. | 4Fe-4S ferredoxin, iron-sulfur binding protein. | 0.919 |
EFF88963.1 | EFF88407.1 | SSTG_04833 | SSTG_06056 | Formate acetyltransferase. | Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.855 |
EFF88963.1 | EFF89488.1 | SSTG_04833 | SSTG_05358 | Formate acetyltransferase. | Oxidoreductase alpha subunit. | 0.439 |
EFF88963.1 | EFF89630.1 | SSTG_04833 | SSTG_05500 | Formate acetyltransferase. | Malate oxidoreductase. | 0.926 |
EFF88963.1 | EFF90197.1 | SSTG_04833 | SSTG_00515 | Formate acetyltransferase. | Formate dehydrogenase. | 0.904 |
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