STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF90817.1HTH-type transcriptional regulator TcmR. (264 aa)    
Predicted Functional Partners:
EFF90816.1
Tetracenomycin C resistance and export protein; Belongs to the major facilitator superfamily.
 
     0.829
EFF90819.1
Conserved hypothetical protein.
 
     0.800
EFF90818.1
Secreted protein.
       0.788
EFF90815.1
Conserved hypothetical protein.
       0.443
EFF90671.1
TetR-family transcriptional regulator.
  
     0.417
EFF88572.1
TetR-family transcriptional regulator.
  
     0.416
EFF89803.1
TetR-family transcriptional regulator.
  
     0.413
EFF88566.1
TetR family transcriptional regulator.
  
     0.412
EFF90715.1
TetR family transcriptional regulator.
  
   
 0.411
EFF89329.1
TetR family transcriptional regulator.
  
     0.409
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.