Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFF91708.1Reductase. (195 aa)    
Predicted Functional Partners:
EFF89276.1
Non-ribosomal peptide synthetase.
  
 
 0.850
EFF94275.1
Non-ribosomal peptide synthetase MxaA; Overlaps another CDS with the same product name.
    
 0.761
EFF89287.1
Non-ribosomal peptide synthetase.
  
 
 0.754
EFF88806.1
Non-ribosomal peptide synthetase.
    
  0.707
EFF89271.1
Non-ribosomal peptide synthetase.
    
  0.707
EFF89286.1
Phosphopantetheine attachment site.
    
  0.707
EFF89280.1
Non-ribosomal peptide synthetase.
    
 0.706
EFF89070.1
ferredoxin-NADP reductase.
     
 0.704
EFF89277.1
SyrP protein.
    
  0.688
EFF93594.1
Linear gramicidin synthetase LgrC.
     
  0.625
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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