Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFF90280.1 | EFF91810.1 | SSTG_00598 | SSTG_02129 | ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Pit accessory protein. | 0.486 |
EFF90280.1 | rnpA | SSTG_00598 | SSTG_02337 | ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.468 |
EFF90350.1 | EFF91810.1 | SSTG_00668 | SSTG_02129 | Phosphate transporter. | Pit accessory protein. | 0.962 |
EFF90871.1 | EFF91810.1 | SSTG_01189 | SSTG_02129 | Guanylate kinase; Unextendable partial coding region. | Pit accessory protein. | 0.497 |
EFF90871.1 | prs | SSTG_01189 | SSTG_01795 | Guanylate kinase; Unextendable partial coding region. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.414 |
EFF91809.1 | EFF91810.1 | SSTG_02128 | SSTG_02129 | Conserved hypothetical protein. | Pit accessory protein. | 0.866 |
EFF91809.1 | EFF91811.1 | SSTG_02128 | SSTG_02130 | Conserved hypothetical protein. | Phosphate transporter. | 0.796 |
EFF91810.1 | EFF90280.1 | SSTG_02129 | SSTG_00598 | Pit accessory protein. | ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.486 |
EFF91810.1 | EFF90350.1 | SSTG_02129 | SSTG_00668 | Pit accessory protein. | Phosphate transporter. | 0.962 |
EFF91810.1 | EFF90871.1 | SSTG_02129 | SSTG_01189 | Pit accessory protein. | Guanylate kinase; Unextendable partial coding region. | 0.497 |
EFF91810.1 | EFF91809.1 | SSTG_02129 | SSTG_02128 | Pit accessory protein. | Conserved hypothetical protein. | 0.866 |
EFF91810.1 | EFF91811.1 | SSTG_02129 | SSTG_02130 | Pit accessory protein. | Phosphate transporter. | 0.996 |
EFF91810.1 | gmk | SSTG_02129 | SSTG_00326 | Pit accessory protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.497 |
EFF91810.1 | prs | SSTG_02129 | SSTG_01795 | Pit accessory protein. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.482 |
EFF91810.1 | rnpA | SSTG_02129 | SSTG_02337 | Pit accessory protein. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.523 |
EFF91810.1 | rpmB | SSTG_02129 | SSTG_03613 | Pit accessory protein. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.522 |
EFF91810.1 | rpmB-2 | SSTG_02129 | SSTG_05337 | Pit accessory protein. | Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.522 |
EFF91811.1 | EFF91809.1 | SSTG_02130 | SSTG_02128 | Phosphate transporter. | Conserved hypothetical protein. | 0.796 |
EFF91811.1 | EFF91810.1 | SSTG_02130 | SSTG_02129 | Phosphate transporter. | Pit accessory protein. | 0.996 |
gmk | EFF91810.1 | SSTG_00326 | SSTG_02129 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Pit accessory protein. | 0.497 |
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