STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF92124.1LuxR family DNA-binding response regulator. (708 aa)    
Predicted Functional Partners:
EFF93466.1
Sensor histidine kinase/response regulator.
  
 0.918
EFF93845.1
DNA-binding response regulator; Truncated CDS.
 
 0.854
EFF94145.1
Two-component system response regulator.
 
 0.848
EFF92511.1
Two-component system response regulator.
 
 0.847
EFF92324.1
Two-component system response regulator.
 
 0.844
EFF91500.1
Two-component system response regulator.
 
 0.843
EFF92208.1
Response regulator, two-component system.
 
 0.843
EFF91488.1
Two-component system response regulator.
 
 0.842
EFF92197.1
Two-component system, regulatory protein.
 
 0.842
EFF90168.1
Two-component system response regulator; Unextendable partial coding region.
 
 0.841
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.