Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFF89926.1 | EFF91307.1 | SSTG_00244 | SSTG_01626 | MerR family transcriptional regulator. | Conserved hypothetical protein. | 0.761 |
EFF89926.1 | EFF93336.1 | SSTG_00244 | SSTG_03655 | MerR family transcriptional regulator. | CTP synthase. | 0.757 |
EFF89926.1 | rpoA | SSTG_00244 | SSTG_02921 | MerR family transcriptional regulator. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.781 |
EFF89926.1 | rpoB | SSTG_00244 | SSTG_02867 | MerR family transcriptional regulator. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.764 |
EFF89926.1 | rpoC | SSTG_00244 | SSTG_02868 | MerR family transcriptional regulator. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.724 |
EFF89926.1 | rpoZ | SSTG_00244 | SSTG_00325 | MerR family transcriptional regulator. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.931 |
EFF89926.1 | whiA | SSTG_00244 | SSTG_00733 | MerR family transcriptional regulator. | Transcriptional regulatory protein whia; Involved in cell division and chromosome segregation. | 0.802 |
EFF89926.1 | whiB-2 | SSTG_00244 | SSTG_02566 | MerR family transcriptional regulator. | WhiB protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.700 |
EFF90040.1 | whiB-2 | SSTG_00358 | SSTG_02566 | Adenine phosphoribosyltransferase; Unextendable partial coding region. | WhiB protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.858 |
EFF91307.1 | EFF89926.1 | SSTG_01626 | SSTG_00244 | Conserved hypothetical protein. | MerR family transcriptional regulator. | 0.761 |
EFF91307.1 | EFF93336.1 | SSTG_01626 | SSTG_03655 | Conserved hypothetical protein. | CTP synthase. | 0.707 |
EFF91307.1 | rpoZ | SSTG_01626 | SSTG_00325 | Conserved hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.646 |
EFF91307.1 | whiB-2 | SSTG_01626 | SSTG_02566 | Conserved hypothetical protein. | WhiB protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.689 |
EFF93000.1 | whiB-2 | SSTG_03319 | SSTG_02566 | Conserved hypothetical protein. | WhiB protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.718 |
EFF93336.1 | EFF89926.1 | SSTG_03655 | SSTG_00244 | CTP synthase. | MerR family transcriptional regulator. | 0.757 |
EFF93336.1 | EFF91307.1 | SSTG_03655 | SSTG_01626 | CTP synthase. | Conserved hypothetical protein. | 0.707 |
EFF93336.1 | rpoZ | SSTG_03655 | SSTG_00325 | CTP synthase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.735 |
EFF93336.1 | whiB-2 | SSTG_03655 | SSTG_02566 | CTP synthase. | WhiB protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.728 |
rpoA | EFF89926.1 | SSTG_02921 | SSTG_00244 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | MerR family transcriptional regulator. | 0.781 |
rpoA | rpoB | SSTG_02921 | SSTG_02867 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
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