STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF92387.1Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (330 aa)    
Predicted Functional Partners:
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
 0.999
EFF92384.1
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
 
 0.999
hemL
Glutamate-1-semialdehyde-2,1-aminomutase.
 
 
 0.997
EFF90074.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.988
EFF89282.1
Non-ribosomal peptide synthetase.
 
 
 0.982
EFF92382.1
glutamyl-tRNA reductase; Unextendable partial coding region.
 
  
 0.970
EFF91317.1
uroporphyrinogen-III synthase domain-containing protein.
  
 0.935
EFF94101.1
Glycine C-acetyltransferase; Truncated CDS.
    
 0.919
EFF89276.1
Non-ribosomal peptide synthetase.
    
  0.870
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
 
 0.839
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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