STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF93177.1Calcium-binding protein. (70 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.912
EFF90871.1
Guanylate kinase; Unextendable partial coding region.
    
  0.912
EFF90152.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type.
   
 0.871
EFF90153.1
Conserved hypothetical protein.
   
 0.871
EFF90690.1
Membrane protein.
    
 0.866
EFF92697.1
Conserved hypothetical protein.
    
 0.866
EFF89961.1
Ankyrin domain-containing protein.
    
 0.865
EFF88820.1
Integral membrane protein.
    
 0.865
EFF88821.1
Membrane protein; Overlaps another CDS with the same product name.
    
 0.865
EFF88822.1
Membrane protein; Overlaps another CDS with the same product name.
    
 0.865
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.