STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF93700.1Chitinase; Truncated CDS. (671 aa)    
Predicted Functional Partners:
EFF93098.1
Chitinase 63.
 
 
0.955
EFF89471.1
Chitinase.
 
 0.948
EFF90924.1
Endochitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.944
EFF89951.1
Conserved hypothetical protein.
    
 
 0.939
EFF89952.1
Conserved hypothetical protein; Unextendable partial coding region.
    
 
 0.939
EFF91790.1
Integral membrane protein.
    
 
 0.939
EFF92503.1
Trans-acting transcriptional protein ICP0.
    
 
 0.939
EFF92504.1
Conserved hypothetical protein.
    
 
 0.939
EFF93311.1
Conserved hypothetical protein.
    
 
 0.939
EFF93312.1
Conserved hypothetical protein.
    
 
 0.939
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.