STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF93781.1Cyclic nucleotide-binding domain-containing protein. (189 aa)    
Predicted Functional Partners:
EFF93466.1
Sensor histidine kinase/response regulator.
   
 0.940
EFF90475.1
Glutamate synthase large subunit.
    
 0.916
EFF92774.1
Adenylate cyclase.
  
 0.895
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.864
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.863
EFF93630.1
Modular polyketide synthase.
  
 0.861
EFF93632.1
Modular polyketide synthase; Overlaps another CDS with the same product name.
  
 0.861
EFF93633.1
Modular polyketide synthase; Overlaps another CDS with the same product name.
  
 0.861
EFF93634.1
Modular polyketide synthase.
  
 0.861
EFF94127.1
Enoyl-[acyl-carrier-protein] reductase.
  
 0.861
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.