Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFF90077.1 | EFF94053.1 | SSTG_00395 | SSTG_04372 | Methyltransferase. | Transcriptional regulator. | 0.650 |
EFF90450.1 | EFF94053.1 | SSTG_00768 | SSTG_04372 | Integral membrane protein. | Transcriptional regulator. | 0.634 |
EFF90475.1 | EFF94053.1 | SSTG_00793 | SSTG_04372 | Glutamate synthase large subunit. | Transcriptional regulator. | 0.766 |
EFF90475.1 | rpoA | SSTG_00793 | SSTG_02921 | Glutamate synthase large subunit. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.495 |
EFF90475.1 | rpoB | SSTG_00793 | SSTG_02867 | Glutamate synthase large subunit. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.769 |
EFF90475.1 | rpoC | SSTG_00793 | SSTG_02868 | Glutamate synthase large subunit. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.730 |
EFF92174.1 | EFF92175.1 | SSTG_02493 | SSTG_02494 | DnaJ protein. | DnaJ protein. | 0.939 |
EFF92174.1 | EFF94053.1 | SSTG_02493 | SSTG_04372 | DnaJ protein. | Transcriptional regulator. | 0.636 |
EFF92174.1 | rpoB | SSTG_02493 | SSTG_02867 | DnaJ protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.475 |
EFF92175.1 | EFF92174.1 | SSTG_02494 | SSTG_02493 | DnaJ protein. | DnaJ protein. | 0.939 |
EFF92175.1 | EFF94053.1 | SSTG_02494 | SSTG_04372 | DnaJ protein. | Transcriptional regulator. | 0.636 |
EFF92175.1 | rpoB | SSTG_02494 | SSTG_02867 | DnaJ protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.475 |
EFF94053.1 | EFF90077.1 | SSTG_04372 | SSTG_00395 | Transcriptional regulator. | Methyltransferase. | 0.650 |
EFF94053.1 | EFF90450.1 | SSTG_04372 | SSTG_00768 | Transcriptional regulator. | Integral membrane protein. | 0.634 |
EFF94053.1 | EFF90475.1 | SSTG_04372 | SSTG_00793 | Transcriptional regulator. | Glutamate synthase large subunit. | 0.766 |
EFF94053.1 | EFF92174.1 | SSTG_04372 | SSTG_02493 | Transcriptional regulator. | DnaJ protein. | 0.636 |
EFF94053.1 | EFF92175.1 | SSTG_04372 | SSTG_02494 | Transcriptional regulator. | DnaJ protein. | 0.636 |
EFF94053.1 | dnaJ | SSTG_04372 | SSTG_01285 | Transcriptional regulator. | Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.636 |
EFF94053.1 | rpoA | SSTG_04372 | SSTG_02921 | Transcriptional regulator. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.724 |
EFF94053.1 | rpoB | SSTG_04372 | SSTG_02867 | Transcriptional regulator. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.764 |
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