STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFF94186.1Laminin G domain-containing protein. (2260 aa)    
Predicted Functional Partners:
EFF94188.1
Conserved hypothetical protein.
     0.978
EFF93640.1
Conserved hypothetical protein.
  
     0.631
EFF94278.1
Mucin-2.
  
     0.496
EFF93716.1
AP endonuclease, family 2.
  
    0.491
EFF93445.1
Integral membrane protein.
   
    0.485
EFF89057.1
Conserved hypothetical protein.
 
    0.475
EFF89333.1
GAF domain-containing protein; Unextendable partial coding region.
  
     0.470
EFF88865.1
Phosphohydrolase.
  
     0.454
EFF89470.1
Secreted protein.
 
 
  0.437
EFF89951.1
Conserved hypothetical protein.
   
   0.430
Your Current Organism:
Streptomyces sp. e14
NCBI taxonomy Id: 645465
Other names: S. sp. e14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.